CDS

Accession Number TCMCG002C28432
gbkey CDS
Protein Id XP_020110048.1
Location join(2292474..2292524,2295227..2295313,2295405..2295512,2296983..2299097,2299475..2299621,2300109..2300620,2304424..2304562)
Gene LOC109725317
GeneID 109725317
Organism Ananas comosus

Protein

Length 1052aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020254459.1
Definition E3 ubiquitin-protein ligase HERC2-like [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category DZ
Description Transcription factor BRX N-terminal domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005085        [VIEW IN EMBL-EBI]
GO:0005086        [VIEW IN EMBL-EBI]
GO:0005088        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005543        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0017016        [VIEW IN EMBL-EBI]
GO:0017112        [VIEW IN EMBL-EBI]
GO:0017137        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0031267        [VIEW IN EMBL-EBI]
GO:0035091        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070300        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAGATCCCGATGGCCATGGGAGGAGAACGAACGGGGAGGTCGACCAGCCTGTTTCTCAACGGTTTTTGCACCTAGAGAAGGAATATTTGTCCTTTTTGCCGATACATAACAGCGGAGAAAGGTCTATTGATCTGATATCCAAAGATAAAGTTGAGGCGGAGGTACGGATTGACAGCATTAATACAATTTTTTCTACAGATCGATGTGGTCGATCGAAGATTGATGGTGAGCTTCATTTTGAGGATACCAAAGATTTGCAGGAGACCAGAGATTTGATTTCTGATAGTCAAAGCAACAACTCCATCAGCACTGTTCTCCCGAAAAGTTCAACTGACAACAACCAAAACATAACAACTCTACCTGTAGTATCTTCTTCAGAAAATTTGGTTTATTTAGAAAGATCAGATGTAACAAATATGCACACAAAGGGGAGCTCTTCAGATGTTTTCCGAGTTAGCGTTTCTAGTGCTCCCAGCACATCTAGTCATGGTTCCGCACAGGATGACTGTGATTCTTTAGGAGATGTTTATGTATGGGGTGAGGTCATATGCGACATTTCTACAAGAAAAGGTCCTGATAAAACTGTTTGGCCTTCAGTTGGTAGAACTGATCTCCTTCTTCCTAAACCCTTGGAATCCAACATAGTTCTCGATGTCTGCCACGTGGCTTGTGGGGTCAGGCATGCTTCCCTGGTTACGAAACATGGGGAGGTCTTTTCTTGGGGAGAAGAGTCAGGTGGTCGTCTTGGTCATGGGGTCGGATCGGACGTTATTCACCCCCGTTTGGTTGAGTCTTTATCAATTTCTAATGTTGAATTTGTTGCATGTGGGGAGTTCCATACATGTGCTATAACCATTGCAGGTGAACTGTATACATGGGGAGATGGGACCCACAATGTTGGGCTTTTGGGTCATGGTACGGATACCTCCCACTGGATTCCTAAGAGGGTTTCGGGACCGCTGGAGGGGCTTCGAGTTGCTTATGTTTCTTGTGGAACCTGGCACACAGCGTTGATCACTTCAGCTGGGCAGCTGTTCACTTTTGGTGATGGAACTTTTGGTGTCTTAGGGCATGGAGATAGAGAGAGTGTCTCTTACCCTAGAGAGGTAGAGTCTTTGATTGGTCTAAAGACGATTGCTGTTGCCTGTGGTGTATGGCATACAGCCGCCGTGGTGGAGGTCATAGTTTCTCACTCTACTACAAGTGTCTCGTCAGGGAAGCTATTCACCTGGGGAGATGGGGACAAGTACCGCCTTGGTCATGGGGATAAGGAACAACGACTTGAACCCACCTGCGTACCTGCCTTGATTGAGTACAATTTCCACAAGGTAGCTTGTGGGCACAGTCTCACTGTCGGCTTGACCACCTCCGGACATGTTTTTACAATGGGTAGCAGTGTTTACGGTCAGCTCGGAAATCCCCAGTCGGATGGGAAGCTTCCTTGTTTGGTGGAAGATAAGCTTTCCGGTGAATCGGTTGGGGACGTTGCTTGTGGTTCATACCATGTTGCAGTTTTGACTAACAAAAGTGAGGTTTTTACTTGGGGGAAAGGAGCAAATGGCAGGTTAGGACACGGCGATCTCGAAGATCGGAAAACACCGACACTTGTTGAAGCTTTGAAGGATAGAGCAGTTAGACATATAGCTTGTGGTGCGAATTTCACTGCTGCTATATGCCAGCATAAATGGGTTTCGGGTTCAGAACAATCTCAGTGTGCCTCATGTAGGCAAGCTTTTGGGTTTACCCGAAAAAGGCATAATTGCTATAATTGTGGACTCGTCCATTGTCATGCTTGTAGTTCAAGAAAGGCATTGAGAGCGGCATTGTCTCCTAATCCCGGAAAGCCATATCGGGTTTGTGATTCCTGTTTCATAAAATTGAGTAAAGTATTGGACTCTTCTGGAATTAATGGCAATAAGAATGCTGTATCCCGCTTCTCTGGTGAAAGCAAAGATAGGCTTGAAAAAGTAGATATGAAATTGGCGAAAGCCATTTTGCCTAGTAATTTGGATATGATGAAGAATTTGGATATCAAAGCAGCTAAGCAAGGGAAGAAGACGGATTCCTTACCATTTATTCGGAACCCTCAGATTAATTCATTGCTGCAACTAAAAGATATCACCTTTTCTGGTGGGATAGACTTGAATAAAGCTGTTCCAAAAGCAGTTCGAACGTCTGTGGTTCACTCTGTAAATCCTTCAAGAGCTGTTTCGCCTTTCTCGCGAAAACCTAGTCCTCCTCGTTCTGCAACTCCTATTCCCACTACTCATGGCCTTTCCTTCTCCAAAAGTGCTGCCGATAGTCTTAAAAAAACGAATGAGCTTCTGAACCAAGAAGTTCAGAAGTTGCGCGCTCAGGTTGATACTCTGAGACAGCGGTGCGAGCTTCAAGAATTTGAGTTGCAGAAGCTAGCGAAGAAGGCCCAAGAAGCCACAGTGGTGGCTGCGGAGGAATCTGCGAAGTCCAAAGCTGCGAAAGAAGTTATAAAGTCACTAACAGCACAGCTTAAAGATATGGCCGAAAGATTGCCTCAGGGTGTTTATGAAGGCGAGGAAATAAAACAAGTCCATATTCCAAATGGCGTCGAGCCACATACTACACACTACTCAAATACAAATGGTTCCCACCAAATAAGAGATGAAAATGGGTTAAACATACATTCTCCCAACTCTATGCACCTGACACATACAAATGGCGATAGTCATGAGATCAATGAAACAAGCGCGCGATTTCAAAACCCTAGGATTGCAAACTCTCACGAATATGAACATAATAACAGAAGGATGCATACTAATGGTTATGAAGAGATGCCAACATCGAGAAATATACTAGAGGAGAATGTCAGCAGGGAGGAGCCGCTGCAAAATGGTGAAAATGGATTGAGGTCTCGGACTACATTGGTAACTACTAATAATCAAGTCGAGGCAGAGTGGATTGAACAGTATGAGCCTGGTGTGTATATAACTCTCGTGGCTCTTCGTGATGGAACCCGAGATTTGAAGAGGGTGCGATTCAGTCGCCGAAGATTTGGGGAGCATCAAGCAGAAGCCTGGTGGTCCGAGAACCGAATTAGGGTTTACGAGAGATATAACGTTCGCTGGTCTGAAAGAGCCTCATCGGCAGCCTCCATTCACTCATTTCAGTCGGCCCGTTGA
Protein:  
MADPDGHGRRTNGEVDQPVSQRFLHLEKEYLSFLPIHNSGERSIDLISKDKVEAEVRIDSINTIFSTDRCGRSKIDGELHFEDTKDLQETRDLISDSQSNNSISTVLPKSSTDNNQNITTLPVVSSSENLVYLERSDVTNMHTKGSSSDVFRVSVSSAPSTSSHGSAQDDCDSLGDVYVWGEVICDISTRKGPDKTVWPSVGRTDLLLPKPLESNIVLDVCHVACGVRHASLVTKHGEVFSWGEESGGRLGHGVGSDVIHPRLVESLSISNVEFVACGEFHTCAITIAGELYTWGDGTHNVGLLGHGTDTSHWIPKRVSGPLEGLRVAYVSCGTWHTALITSAGQLFTFGDGTFGVLGHGDRESVSYPREVESLIGLKTIAVACGVWHTAAVVEVIVSHSTTSVSSGKLFTWGDGDKYRLGHGDKEQRLEPTCVPALIEYNFHKVACGHSLTVGLTTSGHVFTMGSSVYGQLGNPQSDGKLPCLVEDKLSGESVGDVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDLEDRKTPTLVEALKDRAVRHIACGANFTAAICQHKWVSGSEQSQCASCRQAFGFTRKRHNCYNCGLVHCHACSSRKALRAALSPNPGKPYRVCDSCFIKLSKVLDSSGINGNKNAVSRFSGESKDRLEKVDMKLAKAILPSNLDMMKNLDIKAAKQGKKTDSLPFIRNPQINSLLQLKDITFSGGIDLNKAVPKAVRTSVVHSVNPSRAVSPFSRKPSPPRSATPIPTTHGLSFSKSAADSLKKTNELLNQEVQKLRAQVDTLRQRCELQEFELQKLAKKAQEATVVAAEESAKSKAAKEVIKSLTAQLKDMAERLPQGVYEGEEIKQVHIPNGVEPHTTHYSNTNGSHQIRDENGLNIHSPNSMHLTHTNGDSHEINETSARFQNPRIANSHEYEHNNRRMHTNGYEEMPTSRNILEENVSREEPLQNGENGLRSRTTLVTTNNQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAEAWWSENRIRVYERYNVRWSERASSAASIHSFQSAR